obitools/ecopcr
2
0
Fork 0
Code Issues 4 Pull Requests Actions Packages Projects Releases 3 Wiki Activity
37 Commits 2 Branches 6 Tags
4e5d8893e55e9d6e3134d40bd261f0ad7173b62c
Commit Graph

15 Commits

Author SHA1 Message Date
Eric Coissac
957a59eb5d Add management of local taxa from the new extension of the OBI Taxonomy library 
git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@315 60f365c0-8329-0410-b2a4-ec073aeeaa1d
 2011-07-19 06:44:47 +00:00
Eric Coissac
9adf426abf delta bug 
git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@310 60f365c0-8329-0410-b2a4-ec073aeeaa1d
 2011-06-30 15:26:36 +00:00
Eric Coissac
ae528e48f4 delta bug 
git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@309 60f365c0-8329-0410-b2a4-ec073aeeaa1d
 2011-06-30 15:12:38 +00:00
Eric Coissac
f53cc6d500 patch on printing 
git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@299 60f365c0-8329-0410-b2a4-ec073aeeaa1d
 2011-06-15 21:54:33 +00:00
Eric Coissac
8313c67a9b syntax debug on ecopcr.c 
git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@297 60f365c0-8329-0410-b2a4-ec073aeeaa1d
 2011-05-25 16:35:30 +00:00
Eric Coissac
01173d22cf add an hidden -D option 
git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@296 60f365c0-8329-0410-b2a4-ec073aeeaa1d
 2011-05-25 15:41:22 +00:00
Eric Coissac
985d067bd8 New version 0.2 of ecoPCR, with Tm computation. 
Take care file format have change. You must use corresponding version of ecogrep
You can use -t option to go back to the old format without tm computation

git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@239 60f365c0-8329-0410-b2a4-ec073aeeaa1d
 2010-01-22 09:19:19 +00:00
Eric Coissac
f7e25b2082 New version 0.2 of ecoPCR, with Tm computation. 
Take care file format have change. You must use corresponding version of ecogrep
You can use -t option to go back to the old format without tm computation

git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@238 60f365c0-8329-0410-b2a4-ec073aeeaa1d
 2010-01-22 09:16:53 +00:00
Eric Coissac
1428cd7499 patch online help in ecoPCR software 
git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@168 60f365c0-8329-0410-b2a4-ec073aeeaa1d
 2008-05-16 08:53:11 +00:00
Eric Coissac
708b7c387e Sequence circularity, bug correction 
git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@167 60f365c0-8329-0410-b2a4-ec073aeeaa1d
 2008-04-28 16:46:18 +00:00
Eric Coissac
d863b7e48e Manage sequence circularity 
git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@166 60f365c0-8329-0410-b2a4-ec073aeeaa1d
 2008-04-28 15:49:12 +00:00
Eric Coissac
bc4c7656c6 git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@114 60f365c0-8329-0410-b2a4-ec073aeeaa1d 2007-09-24 09:48:08 +00:00
Eric Coissac
420cdb877b add a -k option to the ecoPCR binary to substitute superkingdom column by a kingdom column 
git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@12 60f365c0-8329-0410-b2a4-ec073aeeaa1d
 2007-03-27 16:33:50 +00:00
Eric Coissac
8c91d3d8f3 add a -k option to the ecoPCR binary to substitute superkingdom column by a kingdom column 
git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@11 60f365c0-8329-0410-b2a4-ec073aeeaa1d
 2007-03-27 16:29:20 +00:00
Eric Coissac
ebe8c0b516 Initial version of ecoPCR 
git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@5 60f365c0-8329-0410-b2a4-ec073aeeaa1d
 2007-02-15 13:33:32 +00:00