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• 40f2972bda Actualiser src/libecoPCR/ecorank.c master coissac 2025-06-12 13:35:06 +00:00
• 7db34d77a4 Actualiser src/libecoPCR/ecotax.c coissac 2025-06-12 13:34:30 +00:00
• 3503f66520 Update ecopcr.c to comment a debug message Eric Coissac 2020-04-27 14:10:30 +02:00
• 9deb30a8c4 Patch a bug inducing that sequences were considered as circular whatever the -c option was present or not. Eric Coissac 2020-04-27 12:07:28 +02:00
• c4321036be Fixed length computation bug introduced in last version ecopcr_v1.0.1 Celine Mercier 2019-01-22 15:17:59 +01:00
• a92a7fa070 Fixed version + some git ignore things Celine Mercier 2018-07-30 14:45:48 +02:00
• bd1db764d4 Fixed a bug when primers would touch or overlap, producing amplicons of size <= 0 ecopcr_v1.0.0 Celine Mercier 2018-07-26 19:03:59 +02:00
• f0cca648ea Version 0.8.0 ecopcr_v0.8.0 Celine Mercier 2017-02-06 14:34:57 +01:00
• 573bd5bad7 Removed deprecated code in ecoPCRFormat Celine Mercier 2017-02-06 11:24:32 +01:00
• 17387dae8d Deleted OS X code specificities ecopcr_v0.7.0 Celine Mercier 2017-02-03 13:56:32 +01:00
• 18583c4d2e Changed compilation flags and fixed typo in ecoPCR help Celine Mercier 2017-02-03 11:36:36 +01:00
• 2dd4a217f1 Merge branch 'master' of https://git.metabarcoding.org/obitools/ecopcr ecopcr_v0.6.0 Celine Mercier 2017-02-01 17:12:18 +01:00
• 9a0d77535f Fixing versioning problem with new version 0.6.0 Celine Mercier 2017-02-01 16:50:07 +01:00
• b09bd1455b Add license Eric Coissac 2017-01-11 13:01:41 +01:00
• 194ec811f4 Fixes #2 by adding the missing -D option in the help ecopcr_v0.5.0 Celine Mercier 2015-05-19 13:52:35 +02:00
• 126bf80670 Convert svn:ignore properties to .gitignore. Eric Coissac 2015-05-16 17:51:46 +02:00
• 46d086b215 unsufficient space allocated for handling strings in arguments Frédéric Boyer 2013-03-07 09:25:16 +00:00
• 0a62ff49cc MOD: updated the help to include the -P option Frédéric Boyer 2012-05-16 11:56:36 +00:00
• 2452df90de MOD: Added a [P]ath option displaying for each taxon its full path Frédéric Boyer 2012-05-16 11:43:33 +00:00
• 745d50cfa4 MOD: Corrected condition in getSon to handle the root of the taxonomy Frédéric Boyer 2012-05-16 07:52:28 +00:00
• e2fe83fcb7 remove extra obitools directory from ecoPCR subversion archive Eric Coissac 2012-05-07 09:31:08 +00:00
• 2a118eedda MOD: In the printRepeat function, corrected rdelta and ldelta management Frédéric Boyer 2012-05-07 09:14:09 +00:00
• 93c530e090 removed the "without temperature" option Céline Mercier 2012-05-04 14:53:33 +00:00
• 4e5d8893e5 git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@390 60f365c0-8329-0410-b2a4-ec073aeeaa1d Eric Coissac 2011-12-05 12:59:34 +00:00
• 957a59eb5d Add management of local taxa from the new extension of the OBI Taxonomy library Eric Coissac 2011-07-19 06:44:47 +00:00
• 9adf426abf delta bug Eric Coissac 2011-06-30 15:26:36 +00:00
• ae528e48f4 delta bug Eric Coissac 2011-06-30 15:12:38 +00:00
• f53cc6d500 patch on printing Eric Coissac 2011-06-15 21:54:33 +00:00
• 8313c67a9b syntax debug on ecopcr.c Eric Coissac 2011-05-25 16:35:30 +00:00
• 01173d22cf add an hidden -D option Eric Coissac 2011-05-25 15:41:22 +00:00
• 87c2496447 patch a bug in Tm computation Eric Coissac 2010-05-23 12:30:16 +00:00
• 9867859237 patch for 64bits constants Eric Coissac 2010-02-24 15:10:11 +00:00
• f6f39f58fe patch Tm calculation to return NaN if one of the two sequence is composed with letters different than ACGT Eric Coissac 2010-02-24 15:00:11 +00:00
• 7331dd5612 git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@242 60f365c0-8329-0410-b2a4-ec073aeeaa1d Eric Coissac 2010-01-22 09:21:04 +00:00
• 0214be011e git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@241 60f365c0-8329-0410-b2a4-ec073aeeaa1d Eric Coissac 2010-01-22 09:20:09 +00:00
• 1c30a8604f git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@240 60f365c0-8329-0410-b2a4-ec073aeeaa1d Eric Coissac 2010-01-22 09:19:36 +00:00
• 985d067bd8 New version 0.2 of ecoPCR, with Tm computation. Eric Coissac 2010-01-22 09:19:19 +00:00
• f7e25b2082 New version 0.2 of ecoPCR, with Tm computation. Eric Coissac 2010-01-22 09:16:53 +00:00
• ad6f493d0f Accept to deal with sequence in lower case Eric Coissac 2009-05-13 13:21:10 +00:00
• 1428cd7499 patch online help in ecoPCR software Eric Coissac 2008-05-16 08:53:11 +00:00
• 708b7c387e Sequence circularity, bug correction Eric Coissac 2008-04-28 16:46:18 +00:00
• d863b7e48e Manage sequence circularity Eric Coissac 2008-04-28 15:49:12 +00:00
• 4b74056af8 change reference column for taxonomy filtering in ecogrep.c Eric Coissac 2008-03-12 21:26:08 +00:00
• f68f4af244 Add option to ecoPCRFormat to deal with an obischema db as taxonomy source Eric Coissac 2008-02-08 10:27:42 +00:00
• a1141a77b5 -- Eric Coissac 2007-09-24 10:10:03 +00:00
• 6835206344 Add version file Eric Coissac 2007-09-24 10:07:39 +00:00
• 45c85a9f32 git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@117 60f365c0-8329-0410-b2a4-ec073aeeaa1d Eric Coissac 2007-09-24 10:06:00 +00:00
• 471bf72bf9 Add rule for ecogrep build in makefile Eric Coissac 2007-09-24 09:58:48 +00:00
• 22ecb4b842 git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@115 60f365c0-8329-0410-b2a4-ec073aeeaa1d Eric Coissac 2007-09-24 09:48:19 +00:00
• bc4c7656c6 git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@114 60f365c0-8329-0410-b2a4-ec073aeeaa1d Eric Coissac 2007-09-24 09:48:08 +00:00
• b000ae68d9 git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/branches/refactoring@90 60f365c0-8329-0410-b2a4-ec073aeeaa1d refactoring Eric Coissac 2007-06-29 15:35:04 +00:00
• 2e8c634b80 git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/branches/refactoring@89 60f365c0-8329-0410-b2a4-ec073aeeaa1d Eric Coissac 2007-06-29 15:34:23 +00:00
• aaaf31063d git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/branches/refactoring@88 60f365c0-8329-0410-b2a4-ec073aeeaa1d Eric Coissac 2007-06-29 15:34:06 +00:00
• ddcf0c2fc4 git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/branches/refactoring@87 60f365c0-8329-0410-b2a4-ec073aeeaa1d Eric Coissac 2007-06-29 12:04:27 +00:00
• 9fe0c1ce48 git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/branches/refactoring@86 60f365c0-8329-0410-b2a4-ec073aeeaa1d Eric Coissac 2007-06-29 07:17:45 +00:00
• 8eccd87035 git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/branches/refactoring@85 60f365c0-8329-0410-b2a4-ec073aeeaa1d Eric Coissac 2007-06-29 07:14:53 +00:00
• cacd9854f3 git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/branches/refactoring@84 60f365c0-8329-0410-b2a4-ec073aeeaa1d Eric Coissac 2007-06-29 07:14:44 +00:00
• 212c1fbb7f git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/branches/refactoring@83 60f365c0-8329-0410-b2a4-ec073aeeaa1d Eric Coissac 2007-06-29 07:14:31 +00:00
• 2e7e0f625f git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/branches/refactoring@82 60f365c0-8329-0410-b2a4-ec073aeeaa1d Eric Coissac 2007-06-21 14:04:54 +00:00
• d6fcc7673b git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/branches/refactoring@81 60f365c0-8329-0410-b2a4-ec073aeeaa1d Eric Coissac 2007-06-21 13:58:27 +00:00
• 379ca7988b git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/branches/refactoring@80 60f365c0-8329-0410-b2a4-ec073aeeaa1d Eric Coissac 2007-06-21 13:58:19 +00:00
• 24f958ce1f git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/branches/refactoring@79 60f365c0-8329-0410-b2a4-ec073aeeaa1d Eric Coissac 2007-06-21 13:58:06 +00:00
• 36d536305e git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/branches/refactoring@78 60f365c0-8329-0410-b2a4-ec073aeeaa1d Eric Coissac 2007-06-21 13:57:59 +00:00
• 1c421f5903 git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/branches/refactoring@77 60f365c0-8329-0410-b2a4-ec073aeeaa1d Eric Coissac 2007-06-21 13:57:53 +00:00
• c77c360782 git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/branches/refactoring@76 60f365c0-8329-0410-b2a4-ec073aeeaa1d Eric Coissac 2007-06-20 07:39:40 +00:00
• 163693a132 git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/branches/refactoring@75 60f365c0-8329-0410-b2a4-ec073aeeaa1d Eric Coissac 2007-06-20 07:39:25 +00:00
• 7f39141289 git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/branches/refactoring@74 60f365c0-8329-0410-b2a4-ec073aeeaa1d Eric Coissac 2007-06-20 07:39:12 +00:00
• 433a19fd87 git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/branches/refactoring@73 60f365c0-8329-0410-b2a4-ec073aeeaa1d Eric Coissac 2007-06-20 07:38:54 +00:00
• dc6e7bba69 git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/branches/refactoring@72 60f365c0-8329-0410-b2a4-ec073aeeaa1d Eric Coissac 2007-06-20 07:37:52 +00:00
• f91c7804ab git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/branches/refactoring@71 60f365c0-8329-0410-b2a4-ec073aeeaa1d Eric Coissac 2007-06-20 07:37:40 +00:00
• d94fc0daa4 git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/branches/refactoring@70 60f365c0-8329-0410-b2a4-ec073aeeaa1d Eric Coissac 2007-06-20 07:37:33 +00:00
• d8696f0566 git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/branches/refactoring@69 60f365c0-8329-0410-b2a4-ec073aeeaa1d Eric Coissac 2007-06-20 07:37:27 +00:00
• 388fe75522 git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/branches/refactoring@68 60f365c0-8329-0410-b2a4-ec073aeeaa1d Eric Coissac 2007-06-18 08:46:15 +00:00
• fc26a9fda3 git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/branches/refactoring@67 60f365c0-8329-0410-b2a4-ec073aeeaa1d Eric Coissac 2007-06-15 13:40:14 +00:00
• 8455ed0a99 git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/branches/refactoring@66 60f365c0-8329-0410-b2a4-ec073aeeaa1d Eric Coissac 2007-06-14 14:11:13 +00:00
• ab46791915 git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/branches/refactoring@65 60f365c0-8329-0410-b2a4-ec073aeeaa1d Eric Coissac 2007-06-14 13:38:31 +00:00
• 86253e3712 git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/branches/refactoring@64 60f365c0-8329-0410-b2a4-ec073aeeaa1d Eric Coissac 2007-06-14 13:34:45 +00:00
• 9f4aa93249 git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/branches/refactoring@63 60f365c0-8329-0410-b2a4-ec073aeeaa1d Eric Coissac 2007-06-14 13:01:41 +00:00
• 087ee70620 git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/branches/refactoring@62 60f365c0-8329-0410-b2a4-ec073aeeaa1d Eric Coissac 2007-06-13 11:22:31 +00:00
• c264556629 git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/branches/refactoring@61 60f365c0-8329-0410-b2a4-ec073aeeaa1d Eric Coissac 2007-06-13 09:56:09 +00:00
• 697e16ae98 git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/branches/refactoring@60 60f365c0-8329-0410-b2a4-ec073aeeaa1d Eric Coissac 2007-06-12 08:39:10 +00:00
• cb71eb72f0 git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/branches/refactoring@59 60f365c0-8329-0410-b2a4-ec073aeeaa1d Eric Coissac 2007-06-12 08:38:28 +00:00
• 7fbd940ba2 git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/branches/refactoring@58 60f365c0-8329-0410-b2a4-ec073aeeaa1d Eric Coissac 2007-06-12 08:38:22 +00:00
• cdc0375356 git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/branches/refactoring@57 60f365c0-8329-0410-b2a4-ec073aeeaa1d Eric Coissac 2007-06-12 08:38:16 +00:00
• 51a9cd7399 git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/branches/refactoring@56 60f365c0-8329-0410-b2a4-ec073aeeaa1d Eric Coissac 2007-06-08 14:01:11 +00:00
• 88f0fff090 git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/branches/refactoring@55 60f365c0-8329-0410-b2a4-ec073aeeaa1d Eric Coissac 2007-06-08 14:01:04 +00:00
• 82c93c6d10 git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/branches/refactoring@54 60f365c0-8329-0410-b2a4-ec073aeeaa1d Eric Coissac 2007-06-08 14:00:59 +00:00
• 7bd4139a94 git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/branches/refactoring@53 60f365c0-8329-0410-b2a4-ec073aeeaa1d Eric Coissac 2007-06-08 14:00:52 +00:00
• 0e5b94ad80 git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/branches/refactoring@52 60f365c0-8329-0410-b2a4-ec073aeeaa1d Eric Coissac 2007-06-08 13:07:33 +00:00
• c736f5b59d git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/branches/refactoring@51 60f365c0-8329-0410-b2a4-ec073aeeaa1d Eric Coissac 2007-06-08 12:57:49 +00:00
• 82f8b79cd2 git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/branches/refactoring@50 60f365c0-8329-0410-b2a4-ec073aeeaa1d Eric Coissac 2007-06-08 12:56:40 +00:00
• f3b14b9a8b git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/branches/refactoring@49 60f365c0-8329-0410-b2a4-ec073aeeaa1d Eric Coissac 2007-06-08 12:54:52 +00:00
• 255ab0c670 git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/branches/refactoring@48 60f365c0-8329-0410-b2a4-ec073aeeaa1d Eric Coissac 2007-06-08 12:53:41 +00:00
• 6b28897ff5 git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/branches/refactoring@47 60f365c0-8329-0410-b2a4-ec073aeeaa1d Eric Coissac 2007-06-06 12:37:17 +00:00
• 73786523bb git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/branches/refactoring@46 60f365c0-8329-0410-b2a4-ec073aeeaa1d Eric Coissac 2007-06-06 12:28:47 +00:00
• d1051d2123 git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/branches/refactoring@45 60f365c0-8329-0410-b2a4-ec073aeeaa1d Eric Coissac 2007-06-06 10:16:08 +00:00
• 6a8bf94854 git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/branches/refactoring@44 60f365c0-8329-0410-b2a4-ec073aeeaa1d Eric Coissac 2007-06-06 10:14:29 +00:00
• 3117f978c2 git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/branches/refactoring@43 60f365c0-8329-0410-b2a4-ec073aeeaa1d Eric Coissac 2007-06-06 10:13:43 +00:00
• dcee664315 git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/branches/refactoring@42 60f365c0-8329-0410-b2a4-ec073aeeaa1d Eric Coissac 2007-06-06 10:12:30 +00:00
• cd4ea3fb32 git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/branches/refactoring@41 60f365c0-8329-0410-b2a4-ec073aeeaa1d Eric Coissac 2007-06-06 10:12:18 +00:00