bd1db764d4
Fixed a bug when primers would touch or overlap, producing amplicons of
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size <= 0
2018-07-26 19:03:59 +02:00
f0cca648ea
Version 0.8.0
2017-02-06 14:34:57 +01:00
18583c4d2e
Changed compilation flags and fixed typo in ecoPCR help
2017-02-03 11:36:36 +01:00
9a0d77535f
Fixing versioning problem with new version 0.6.0
2017-02-01 16:50:07 +01:00
194ec811f4
Fixes #2 by adding the missing -D option in the help
2015-05-19 13:52:35 +02:00
2a118eedda
MOD: In the printRepeat function, corrected rdelta and ldelta management
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git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@417 60f365c0-8329-0410-b2a4-ec073aeeaa1d
2012-05-07 09:14:09 +00:00
93c530e090
removed the "without temperature" option
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git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@416 60f365c0-8329-0410-b2a4-ec073aeeaa1d
2012-05-04 14:53:33 +00:00
957a59eb5d
Add management of local taxa from the new extension of the OBI Taxonomy library
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git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@315 60f365c0-8329-0410-b2a4-ec073aeeaa1d
2011-07-19 06:44:47 +00:00
9adf426abf
delta bug
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git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@310 60f365c0-8329-0410-b2a4-ec073aeeaa1d
2011-06-30 15:26:36 +00:00
ae528e48f4
delta bug
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git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@309 60f365c0-8329-0410-b2a4-ec073aeeaa1d
2011-06-30 15:12:38 +00:00
f53cc6d500
patch on printing
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git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@299 60f365c0-8329-0410-b2a4-ec073aeeaa1d
2011-06-15 21:54:33 +00:00
8313c67a9b
syntax debug on ecopcr.c
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git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@297 60f365c0-8329-0410-b2a4-ec073aeeaa1d
2011-05-25 16:35:30 +00:00
01173d22cf
add an hidden -D option
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git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@296 60f365c0-8329-0410-b2a4-ec073aeeaa1d
2011-05-25 15:41:22 +00:00
985d067bd8
New version 0.2 of ecoPCR, with Tm computation.
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Take care file format have change. You must use corresponding version of ecogrep
You can use -t option to go back to the old format without tm computation
git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@239 60f365c0-8329-0410-b2a4-ec073aeeaa1d
2010-01-22 09:19:19 +00:00
f7e25b2082
New version 0.2 of ecoPCR, with Tm computation.
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Take care file format have change. You must use corresponding version of ecogrep
You can use -t option to go back to the old format without tm computation
git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@238 60f365c0-8329-0410-b2a4-ec073aeeaa1d
2010-01-22 09:16:53 +00:00
1428cd7499
patch online help in ecoPCR software
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git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@168 60f365c0-8329-0410-b2a4-ec073aeeaa1d
2008-05-16 08:53:11 +00:00
708b7c387e
Sequence circularity, bug correction
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git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@167 60f365c0-8329-0410-b2a4-ec073aeeaa1d
2008-04-28 16:46:18 +00:00
d863b7e48e
Manage sequence circularity
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git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@166 60f365c0-8329-0410-b2a4-ec073aeeaa1d
2008-04-28 15:49:12 +00:00
bc4c7656c6
git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@114 60f365c0-8329-0410-b2a4-ec073aeeaa1d
2007-09-24 09:48:08 +00:00
420cdb877b
add a -k option to the ecoPCR binary to substitute superkingdom column by a kingdom column
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git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@12 60f365c0-8329-0410-b2a4-ec073aeeaa1d
2007-03-27 16:33:50 +00:00
8c91d3d8f3
add a -k option to the ecoPCR binary to substitute superkingdom column by a kingdom column
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git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@11 60f365c0-8329-0410-b2a4-ec073aeeaa1d
2007-03-27 16:29:20 +00:00
ebe8c0b516
Initial version of ecoPCR
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git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@5 60f365c0-8329-0410-b2a4-ec073aeeaa1d
2007-02-15 13:33:32 +00:00
