obitools/ecoprimers
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22 Commits 4 Branches 2 Tags
b0521a7e15e87f87e6caec2ab89b5eb507e4c85c
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Author SHA1 Message Date
Eric Coissac
b0521a7e15 Accept to deal with sequence in lower case 
git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPrimers/trunk@214 60f365c0-8329-0410-b2a4-ec073aeeaa1d
 2009-05-13 07:33:39 +00:00
Eric Coissac
b7c1640042 New version 0.3 with filtering on short words 
git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPrimers/trunk@213 60f365c0-8329-0410-b2a4-ec073aeeaa1d
 2009-05-13 06:51:25 +00:00
Eric Coissac
5dc55c7f53 Some linux patch 
git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPrimers/trunk@212 60f365c0-8329-0410-b2a4-ec073aeeaa1d
 2009-05-12 15:48:59 +00:00
Eric Coissac
04ee4e531c remove final binary from archive 
git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPrimers/trunk@211 60f365c0-8329-0410-b2a4-ec073aeeaa1d
 2009-05-12 09:17:52 +00:00
Eric Coissac
b092497eaf add property to ignore *.P files 
git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPrimers/trunk@210 60f365c0-8329-0410-b2a4-ec073aeeaa1d
 2009-05-12 09:16:09 +00:00
Eric Coissac
6624181788 remove *.P files 
git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPrimers/trunk@209 60f365c0-8329-0410-b2a4-ec073aeeaa1d
 2009-05-12 09:13:13 +00:00
Eric Coissac
81ada091bf Add option to log memory statistics during primer identifications 
git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPrimers/trunk@208 60f365c0-8329-0410-b2a4-ec073aeeaa1d
 2009-05-12 09:06:43 +00:00
Eric Coissac
c5a430ea80 git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPrimers/trunk@207 60f365c0-8329-0410-b2a4-ec073aeeaa1d 2009-04-28 21:20:20 +00:00
Eric Coissac
c308fb2edc Patch eco_malloc functions to allow more than 4Gb allocation on 64bits version 
git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPrimers/trunk@206 60f365c0-8329-0410-b2a4-ec073aeeaa1d
 2009-04-28 08:19:50 +00:00
Eric Coissac
796274d746 some patches to compile on linux 
git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPrimers/trunk@205 60f365c0-8329-0410-b2a4-ec073aeeaa1d
 2009-04-23 22:22:27 +00:00
Eric Coissac
c36bc5e838 Second run of patch 
git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPrimers/trunk@204 60f365c0-8329-0410-b2a4-ec073aeeaa1d
 2009-04-23 11:38:52 +00:00
Eric Coissac
313dd59f5a First run of patch 
git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPrimers/trunk@203 60f365c0-8329-0410-b2a4-ec073aeeaa1d
 2009-04-22 08:15:18 +00:00
Eric Coissac
e869d6daed git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPrimers/trunk@202 60f365c0-8329-0410-b2a4-ec073aeeaa1d 2009-04-20 08:40:32 +00:00
Eric Coissac
93b327285a git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPrimers/trunk@201 60f365c0-8329-0410-b2a4-ec073aeeaa1d 2009-04-20 08:40:14 +00:00
Eric Coissac
e3d922e103 Merge of eric-test branche to the trunk 
git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPrimers/trunk@200 60f365c0-8329-0410-b2a4-ec073aeeaa1d
 2009-04-20 08:38:41 +00:00
Eric Coissac
b8af5dd65f Merge of eric-test branche to the trunk 
git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPrimers/trunk@199 60f365c0-8329-0410-b2a4-ec073aeeaa1d
 2009-04-20 08:31:30 +00:00
Eric Coissac
4f9d76f0f2 New version based on sort them merge algorithm 
git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPrimers/trunk@182 60f365c0-8329-0410-b2a4-ec073aeeaa1d
 2009-03-04 22:37:58 +00:00
Eric Coissac
b5b0ca7e9d git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPrimers/trunk@181 60f365c0-8329-0410-b2a4-ec073aeeaa1d 2009-03-04 22:35:06 +00:00
Eric Coissac
64838c1cdf New version based on sort them merge algorithm 
git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPrimers/trunk@180 60f365c0-8329-0410-b2a4-ec073aeeaa1d
 2009-03-04 22:32:55 +00:00
Eric Coissac
6d8bb449d5 delete old version 
git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPrimers/trunk@179 60f365c0-8329-0410-b2a4-ec073aeeaa1d
 2009-03-04 22:22:48 +00:00
Eric Coissac
f9410e5aee Initial commit for this soft 
git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPrimers/trunk@175 60f365c0-8329-0410-b2a4-ec073aeeaa1d
 2008-10-13 10:39:14 +00:00
Eric Coissac
f5abbabb54 initial project 
git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPrimers/trunk@172 60f365c0-8329-0410-b2a4-ec073aeeaa1d
 2008-10-13 09:45:11 +00:00