1264 Commits

Author SHA1 Message Date
c4235fa955 new try 2012-05-03 17:18:14 +00:00
a96c045668 new try 2012-05-03 17:14:53 +00:00
f038eb700b Try to generate documentation on commit 2012-05-03 17:10:28 +00:00
54c5bfad38 Try to generate documentation on commit bis 2012-05-03 17:03:33 +00:00
5331595cce Try to generate documentation on commit bis 2012-05-03 17:02:07 +00:00
8ca17ce89c Try to generate documentation on commit 2012-05-03 16:55:11 +00:00
a9ae922d25 Supress unused import 2012-05-03 16:30:46 +00:00
57381d1348 Test commit on OBITools 2012-05-01 14:48:36 +00:00
451e63d922 Test commit on OBITools 2012-05-01 14:45:28 +00:00
9cc954ffe0 test hhok 2012-04-29 14:45:07 +00:00
1ee8700324 Add input and output options to solexaPairEnd 2012-04-25 12:42:06 +00:00
154e50ed43 Patch of several bugs related to the Cython switch 2012-04-25 12:16:07 +00:00
8134d8fbfd Add input and output options to solexaPairEnd 2012-04-25 11:05:06 +00:00
6a45d563d4 Add input and output options to solexaPairEnd 2012-04-25 10:53:18 +00:00
f3e6c41c56 Add input and output options to solexaPairEnd 2012-04-25 10:52:57 +00:00
e37bef2eab bug about the progressbar on large files 2012-04-25 10:22:15 +00:00
e82c03a4ad add math module in the obiannotate environment 2012-04-25 09:20:30 +00:00
f7753ec2e5 bug about the progressbar on large files 2012-04-25 09:05:37 +00:00
f15f13a4c8 A big jump into cython for increasing speed
==> checked with cython 1.6
2012-04-25 05:59:15 +00:00
155a43b1ef A big jump into cython for increasing speed
==> checked with cython 1.6
2012-04-25 05:58:48 +00:00
1f5fcd8025 Test for a new version of the ecoTag sequence Matcher 2012-04-17 12:40:25 +00:00
a74585cdab Edited the help 2012-04-17 11:47:31 +00:00
53f6640bba Test for a new version of the ecoTag sequence Matcher 2012-04-17 11:35:37 +00:00
7b0033a1b6 putting things back like before 2012-04-03 14:43:18 +00:00
acf5a309f4 trying something 2012-04-03 14:15:56 +00:00
63ccdcea7f complement no direct match sequence 2012-04-02 17:07:42 +00:00
39f5e68f34 Patch a bug for primers without tags 2012-04-02 14:31:35 +00:00
fa06ae6bbc ADDED file : Missing cython generated file 2012-04-02 11:54:32 +00:00
54931de401 2012-03-28 15:17:23 +00:00
1f6e2ca6c6 2012-03-28 13:49:43 +00:00
68d84a3795 2012-03-28 13:49:02 +00:00
62c5268702 first version of the ngssim script 2012-03-28 09:47:47 +00:00
7f6c1ccf7a introduced patch from sumatra 2012-03-27 09:11:50 +00:00
dc3e78e586 2012-03-27 08:44:52 +00:00
81479249a1 2012-03-27 08:42:17 +00:00
63bf2cfe1a 2012-03-26 14:35:52 +00:00
a8be7b2f5c Add a special case if aligment does not work and alilength==0 2012-03-07 11:06:56 +00:00
efad784aeb bug patch 2012-03-07 09:21:45 +00:00
e201fb1355 tag a new version 2012-03-01 10:22:16 +00:00
5dc7f39fa5 Edited the doc 2012-02-27 08:09:40 +00:00
dc55ec421a alignment for profiles 2012-02-08 13:02:57 +00:00
bc573f3f39 committing the profiles files 2012-02-08 13:02:04 +00:00
19285da85f two bug patches 2012-02-02 17:10:56 +00:00
f854e73318 CodonNWS aligner : first commit 2012-02-01 10:13:06 +00:00
a1f16f43b3 Edited the doc 2012-02-01 10:09:36 +00:00
2872552374 fini de rire 2012-01-13 14:28:16 +00:00
c93e17d131 juste pour rire 2012-01-13 14:27:12 +00:00
12a5adac05 set progdoc=__doc__ in the getOptionManager call 2012-01-06 17:03:51 +00:00
537e951efe Edited the doc 2011-12-08 15:12:09 +00:00
dcda77f7b5 2011-12-01 11:31:49 +00:00