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small doc fixes

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This commit is contained in:
MercierC
2021-03-29 13:07:48 +13:00
parent 89b0c48141
commit 169b6514b4
13 changed files with 13 additions and 13 deletions
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2
python/obitools3/commands/addtaxids.pyx
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@ -26,7 +26,7 @@ import sys
from cpython.exc cimport PyErr_CheckSignals
__title__="Annotate sequences with their corresponding NCBI taxid found from the taxon scientific name."
__title__="Annotate sequences with their corresponding NCBI taxid found from the taxon scientific name"

2
python/obitools3/commands/align.pyx
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@ -19,7 +19,7 @@ import time
import sys
__title__="Aligns one sequence column with itself or two sequence columns"
__title__="Align one sequence column with itself or two sequence columns"
def addOptions(parser):

2
python/obitools3/commands/alignpairedend.pyx
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@ -23,7 +23,7 @@ import os
from cpython.exc cimport PyErr_CheckSignals
__title__="Aligns paired-ended reads"
__title__="Align paired-ended reads"

2
python/obitools3/commands/build_ref_db.pyx
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@ -16,7 +16,7 @@ import sys
from cpython.exc cimport PyErr_CheckSignals
__title__="Tag a set of sequences for PCR and sequencing errors identification"
__title__="Build a reference database for ecotag"
def addOptions(parser):

2
python/obitools3/commands/cat.pyx
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@ -22,7 +22,7 @@ import sys
from cpython.exc cimport PyErr_CheckSignals
__title__="Concatenate views."
__title__="Concatenate views"
def addOptions(parser):

2
python/obitools3/commands/count.pyx
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@ -10,7 +10,7 @@ from obitools3.dms.capi.obiview cimport COUNT_COLUMN
from cpython.exc cimport PyErr_CheckSignals
__title__="Counts sequence records"
__title__="Count sequence records"
def addOptions(parser):

2
python/obitools3/commands/head.pyx
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@ -16,7 +16,7 @@ from io import BufferedWriter
from cpython.exc cimport PyErr_CheckSignals
__title__="Keep the N first lines of a view."
__title__="Keep the N first lines of a view"
def addOptions(parser):

2
python/obitools3/commands/import.pyx
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@ -52,7 +52,7 @@ from cpython.exc cimport PyErr_CheckSignals
from io import BufferedWriter
__title__="Imports sequences from different formats into a DMS"
__title__="Import sequences from different formats into a DMS"
default_config = { 'destview' : None,

2
python/obitools3/commands/ngsfilter.pyx
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@ -24,7 +24,7 @@ from cpython.exc cimport PyErr_CheckSignals
from io import BufferedWriter
__title__="Assigns sequence records to the corresponding experiment/sample based on DNA tags and primers"
__title__="Assign sequence records to the corresponding experiment/sample based on DNA tags and primers"
def addOptions(parser):

2
python/obitools3/commands/sort.pyx
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@ -36,7 +36,7 @@ NULL_VALUE = {OBI_BOOL: OBIBool_NA,
OBI_STR: b""}
__title__="Sort view lines according to the value of a given attribute."
__title__="Sort view lines according to the value of a given attribute"
def addOptions(parser):

2
python/obitools3/commands/stats.pyx
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@ -16,7 +16,7 @@ import sys
from cpython.exc cimport PyErr_CheckSignals
__title__="Compute basic statistics for attribute values."
__title__="Compute basic statistics for attribute values"
'''
`obi stats` computes basic statistics for attribute values of sequence records.

2
python/obitools3/commands/tail.pyx
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@ -15,7 +15,7 @@ from cpython.exc cimport PyErr_CheckSignals
from io import BufferedWriter
__title__="Keep the N last lines of a view."
__title__="Keep the N last lines of a view"
def addOptions(parser):

2
python/obitools3/commands/test.pyx
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@ -39,7 +39,7 @@ COL_COMMENTS_MAX_LEN = 2048
MAX_INT = 2147483647 # used to generate random float values
__title__="Tests if the obitools are working properly"
__title__="Test if the obitools are working properly"
default_config = {