obi import: fixed critical bug where the last entry of embl and genbank

files was not imported
2020-04-09 19:26:27 +02:00
parent 98cfb70d73
commit cd9cea8c97
2 changed files with 6 additions and 0 deletions
--- a/python/obitools3/parsers/embl.pyx
+++ b/python/obitools3/parsers/embl.pyx
@ -156,6 +156,9 @@ def emblIterator_file(lineiterator,
        yield seq
        read+=1
    
+    # Last sequence
+    seq = emblParser(entry)
+        
    yield seq
    
    free(entry)
--- a/python/obitools3/parsers/genbank.pyx
+++ b/python/obitools3/parsers/genbank.pyx
@ -153,6 +153,9 @@ def genbankIterator_file(lineiterator,
        yield seq
        read+=1
    
+    # Last sequence
+    seq = genbankParser(entry)
+    
    yield seq
    
    free(entry)