Commit Graph

41 Commits

Author SHA1 Message Date
ad8de80353 Views: better checks when adding an existing column to a view 2017-04-06 14:44:07 +02:00
778acc48cd Added linked lists to handle lists of column pointers in views (not
tested)
2017-03-06 16:06:17 +01:00
3319ede837 Views: Column dictionaries now store and return pointers on column
pointers instead of column pointers.
2017-02-22 13:49:50 +01:00
e524041013 Views: Files for unfinished views now have the extension
'.obiview_unfinished', renamed to '.obiview' when the view is finished.
2017-02-07 17:16:09 +01:00
936be64c34 Goes with 5e0c9f87 (missing ';' and fixed compilation warnings) 2016-12-05 11:18:29 +01:00
852e5488c8 The default element names for columns with multiple elements per line
are now "O;1;2;...;n"
2016-12-02 17:54:51 +01:00
e60497651c Updated the documentation for the functions to set and get in the
context of a view
2016-11-30 12:22:47 +01:00
4ad8c16a73 Finished adding all the functions to directly set and get indices in
columns containing indices referring to any type of data.
2016-11-30 11:08:11 +01:00
3e53f9418b Added functions to recover the indexes themselves from any column
referring to indexed values
2016-11-28 11:35:19 +01:00
f897e87600 When closing a view, it is now automatically checked that all OBI_QUAL
columns correspond to their associated OBI_SEQ column
2016-11-25 12:04:57 +01:00
70e056a2aa It is now impossible to open or clone a view that is not finished (= has
been closed at least once)
2016-11-24 11:19:07 +01:00
621b4972db Functions to get obiblobs through views 2016-11-18 15:59:50 +01:00
b408a4f6eb Changed file name limits to adapt to system limits + minor changes 2016-09-22 18:05:07 +02:00
b083745f56 Deleted the "new line selection while editing a view" system 2016-09-22 11:19:29 +02:00
bb25723d99 Improved documentation of a function 2016-09-21 17:30:39 +02:00
acc0da2d0b Readjusted some limits for file names and file numbers to be under OS
limits
2016-09-05 12:39:04 +02:00
7b780ffb28 View files now have a dynamic size to allow unlimited comments size 2016-08-18 17:57:03 +02:00
e4129610cf Quality columns are now optional in NUC_SEQS views + minor fixes 2016-08-16 15:17:26 +02:00
26b8e1f215 Modified C API to set and get in columns: added functions to set and get
using column names instead of pointers, and changed function names
2016-08-02 16:33:19 +02:00
312f50ff0f Major update: Column aliases. Columns are now identified in the context
of a view by an alias that can be modified.
2016-08-01 18:25:30 +02:00
3843485a04 Deleted deprecated function declaration that would make compilation
impossible and fixed error in documentation
2016-07-22 16:21:02 +02:00
20425a5d2b Deleted deprecated structure declarations 2016-07-19 15:48:56 +02:00
56e4848ebd The predicates associated with a view are now described in its comments
field
2016-07-19 15:31:21 +02:00
38718320f9 First version for the association of one column to another. Closes #55 2016-07-15 15:38:49 +02:00
8ee85c3005 A first version of predicate functions that are checked when a new view
is saved and closed
2016-07-12 14:54:11 +02:00
0869b9ba3f Closes issue #47 by storing each view in a separate file named with the
view's name and created upon view creation.
2016-06-30 11:41:30 +02:00
6e3f5b230e Fixed typo in doc 2016-06-03 18:56:45 +02:00
3b59043ea8 Major update: New column type to store sequence qualities. Closes #41 2016-05-20 16:45:22 +02:00
6a8df069ad Indexers are now cloned if needed to modify them after they've been
closed. Obligatory indexers' names now follow the same pattern as other
indexers (columnname_version). Closes #46 and #49.
2016-05-18 13:23:48 +02:00
87935c6678 Fixed all compilation problems with new function names, locations etc 2016-04-25 18:35:02 +02:00
92980508c0 Made the function to clone a column in the context of a view private 2016-04-25 18:15:25 +02:00
65880db422 Made function to update the line count of a view private 2016-04-25 18:11:37 +02:00
767d9c7804 Reordered view functions for better coherence 2016-04-25 18:07:58 +02:00
8cdfbb379e Documentation for views and reworked the code a little 2016-04-25 17:58:12 +02:00
2aafecc3b5 Changed sequence 'description' to 'definition' everywhere 2016-04-15 16:31:43 +02:00
9d042f7bd0 Refactored and relocated the set and get functions of all column types,
both within and out of the context of a view
2016-04-13 15:10:24 +02:00
d8107533d8 Obiblob_indexer API 2016-04-12 14:53:33 +02:00
a08def47e6 It is now impossible to create a view with a name identical to one of an
existing written view
2016-03-01 13:36:54 +01:00
fc5a12bad7 Closes #34 2016-02-29 17:56:55 +01:00
4df313c54a Added Obiviews specialized for the handling of nucleotide sequences 2016-02-25 09:43:27 +01:00
a8f03248a8 Major update : views 2016-02-18 10:38:51 +01:00