obitools/obitools4
2
0
Fork 0
mirror of https://github.com/metabarcoding/obitools4.git synced 2025-06-29 16:20:46 +00:00
Code Issues Packages Projects Releases Wiki Activity

change default of output options and add the actual printing of the column sequence

Browse Source 
Former-commit-id: bc3adf7ddecca3683def980ffc8a8bd63410ab3a
This commit is contained in:
Eric Coissac
2023-06-07 17:47:06 +02:00
parent 7f08f58336
commit e29dacc1ba
2 changed files with 4 additions and 3 deletions
Download Patch File Download Diff File Expand all files Collapse all files

1
pkg/obitools/obicsv/obicsv.go
View File

@ -36,6 +36,7 @@ func CLIWriteCSV(iterator obiiter.IBioSequence,
obiformats.CSVTaxon(CLIPrintTaxon()), obiformats.CSVTaxon(CLIPrintTaxon()),
obiformats.CSVDefinition(CLIPrintDefinition()), obiformats.CSVDefinition(CLIPrintDefinition()),
obiformats.CSVKeys(CLIToBeKeptAttributes()), obiformats.CSVKeys(CLIToBeKeptAttributes()),
obiformats.CSVSequence(CLIPrintSequence()),
) )
var err error var err error

6
pkg/obitools/obicsv/options.go
View File

@ -6,11 +6,11 @@ import (
"github.com/DavidGamba/go-getoptions" "github.com/DavidGamba/go-getoptions"
) )
var _outputIds = true var _outputIds = false
var _outputCount = false var _outputCount = false
var _outputTaxon = false var _outputTaxon = false
var _outputSequence = true var _outputSequence = false
var _outputQuality = true var _outputQuality = false
var _outputDefinition = false var _outputDefinition = false
var _obipairing = false var _obipairing = false
var _autoColumns = false var _autoColumns = false