575 Commits

Author SHA1 Message Date
6571296bb2 Add some documentation 2022-01-16 19:53:39 +01:00
64676db3f4 Connect the command line options to the algorithm of obipairing 2022-01-16 17:30:30 +01:00
576a9f4d2d A global version of a Slice pool 2022-01-16 00:21:42 +01:00
e1b7e1761c Change the memory management for thee BuildAlignment function 2022-01-15 19:10:16 +01:00
e8fff6477b Work on iterators and recycling of biosequences 2022-01-14 23:11:36 +01:00
ef66ca4972 Code refactoring 2022-01-14 17:32:12 +01:00
5753723618 Code refactoring 2022-01-14 17:17:54 +01:00
ff40222902 Code reefactoring 2022-01-14 16:10:19 +01:00
45a1765a03 Code refactoring 2022-01-14 15:46:36 +01:00
2163db94d0 Code refactoring 2022-01-14 15:36:39 +01:00
402d54cb62 Code refactoring 2022-01-14 15:30:01 +01:00
0d92b1f772 small changes 2022-01-14 15:22:10 +01:00
7d4d1f1e96 Just some personnal development notes 2022-01-14 15:21:42 +01:00
191570f675 First attempt of a Makefile originally copied from https://raw.githubusercontent.com/vincentbernat/hellogopher/master/Makefile 2022-01-14 15:21:00 +01:00
a0ba77792a Adds fasta and fastq file to the main gitignore file 2022-01-14 15:20:11 +01:00
e80a1114aa removes empty file 2022-01-14 15:19:11 +01:00
bfa724dca3 adds the bin directory to the gitignore file 2022-01-14 15:18:36 +01:00
3848c54184 Refactoring 2022-01-14 15:16:41 +01:00
69c61bc190 Documentation and refactoring 2022-01-14 15:15:26 +01:00
bb63a424e9 Remove an old test file out of interest 2022-01-14 14:59:33 +01:00
236c7277e0 Adds documentation and reformats names 2022-01-14 14:58:59 +01:00
4d2fb8a781 Some sample sequence files 2022-01-13 23:44:31 +01:00
b9b9c0f179 Patch module name from oa2 to obitools 2022-01-13 23:43:01 +01:00
f53bf1b804 First commit 2022-01-13 23:27:39 +01:00
dab6549cad Initial commit 2022-01-13 23:15:22 +01:00