obitools/obitools4
2
0
Fork 0
mirror of https://github.com/metabarcoding/obitools4.git synced 2026-03-25 05:20:52 +00:00
Code Issues Packages Projects Releases Wiki Activity
645 Commits 13 Branches 27 Tags
d7f615108f1a5522cc5bd1049f1daf975c258a8a
Commit Graph

4 Commits

Author SHA1 Message Date
Eric Coissac
d7f615108f Bump version to 4.4.6 
Update version from 4.4.5 to 4.4.6 in version.txt and pkg/obioptions/version.go
 2026-02-05 18:02:30 +01:00
Eric Coissac
71574f240b Update version and add CI tests 
Update version to 4.4.5 and add a test job in the release workflow to ensure tests pass before creating a release.
 2026-02-05 18:02:28 +01:00
Eric Coissac
02ab683fa0 Bump version to 4.4.4 
Update version from 4.4.3 to 4.4.4 in version.txt and pkg/obioptions/version.go
 2026-02-05 17:42:01 +01:00
Eric Coissac
e3c41fc11b Add Jaccard distance and similarity computations for KmerSet and KmerSetGroup 
Add Jaccard distance and similarity computations for KmerSet and KmerSetGroup

This commit introduces Jaccard distance and similarity methods for KmerSet and KmerSetGroup.

For KmerSet:
- Added JaccardDistance method to compute the Jaccard distance between two KmerSets
- Added JaccardSimilarity method to compute the Jaccard similarity between two KmerSets

For KmerSetGroup:
- Added JaccardDistanceMatrix method to compute a pairwise Jaccard distance matrix
- Added JaccardSimilarityMatrix method to compute a pairwise Jaccard similarity matrix

Also includes:
- New DistMatrix implementation in pkg/obidist for storing and computing distance/similarity matrices
- Updated version handling with bump-version target in Makefile
- Added tests for all new methods
 2026-02-05 17:39:23 +01:00