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471bf72bf9
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Add rule for ecogrep build in makefile
git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@116 60f365c0-8329-0410-b2a4-ec073aeeaa1d
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2007-09-24 09:58:48 +00:00 |
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22ecb4b842
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git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@115 60f365c0-8329-0410-b2a4-ec073aeeaa1d
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2007-09-24 09:48:19 +00:00 |
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bc4c7656c6
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git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@114 60f365c0-8329-0410-b2a4-ec073aeeaa1d
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2007-09-24 09:48:08 +00:00 |
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6cd1141130
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Add capacity to format fasta files, with taxonomical data described in title line in the following format :
[taxon: ####] where #### is a taxid from NCBI taxonomy. It can be as precise as possible (species, genus or even root)
git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@13 60f365c0-8329-0410-b2a4-ec073aeeaa1d
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2007-05-02 10:10:27 +00:00 |
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420cdb877b
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add a -k option to the ecoPCR binary to substitute superkingdom column by a kingdom column
git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@12 60f365c0-8329-0410-b2a4-ec073aeeaa1d
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2007-03-27 16:33:50 +00:00 |
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8c91d3d8f3
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add a -k option to the ecoPCR binary to substitute superkingdom column by a kingdom column
git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@11 60f365c0-8329-0410-b2a4-ec073aeeaa1d
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2007-03-27 16:29:20 +00:00 |
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b2c307e611
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replace bracket by braces
git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@10 60f365c0-8329-0410-b2a4-ec073aeeaa1d
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2007-03-15 11:53:50 +00:00 |
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9726434b46
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Add patch in to eliminate sequence without taxonomic data
git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@9 60f365c0-8329-0410-b2a4-ec073aeeaa1d
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2007-03-14 16:13:23 +00:00 |
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78205cb1a3
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patch to correct bug in switch between parts of the sequence database
git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@8 60f365c0-8329-0410-b2a4-ec073aeeaa1d
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2007-02-15 17:23:39 +00:00 |
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f31a7679c6
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git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@7 60f365c0-8329-0410-b2a4-ec073aeeaa1d
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2007-02-15 15:17:47 +00:00 |
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8d9e519b52
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Add of CECILL Licence
git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@6 60f365c0-8329-0410-b2a4-ec073aeeaa1d
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2007-02-15 14:21:28 +00:00 |
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ebe8c0b516
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Initial version of ecoPCR
git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@5 60f365c0-8329-0410-b2a4-ec073aeeaa1d
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2007-02-15 13:33:32 +00:00 |
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f3d2273d8d
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git-svn-id: https://www.grenoble.prabi.fr/svn/LECASofts/ecoPCR/trunk@3 60f365c0-8329-0410-b2a4-ec073aeeaa1d
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2007-02-15 13:25:04 +00:00 |
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