 mercierc
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747f3efbb2
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Improved taxonomy reading information display
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2021-07-21 15:20:44 +12:00 |
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mercierc
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6c1a3aff47
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Fixed the handling of sample names that are numbers (forcing conversion)
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2021-07-21 15:19:24 +12:00 |
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mercierc
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e2932b05f2
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Implements #108 export integer missing values as 0 for tables by default
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2021-07-21 14:41:54 +12:00 |
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mercierc
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32345b9ec4
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Addresses #111
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2021-07-19 15:55:25 +12:00 |
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mercierc
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9334cf6cc6
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import: improved genbank parser and switch to version 3.0.1.b10
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2021-06-17 08:42:01 +12:00 |
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mercierc
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8ec13a294c
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Switch to version 3.0.1b9
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2021-06-01 09:21:43 +12:00 |
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mercierc
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3e45c34491
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import: now imports and adds taxids for SILVA and RDP files, added
import of lists, fixed skipping of errors (was not overwriting), and
fixed --no-progress-bar option
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2021-06-01 09:21:07 +12:00 |
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mercierc
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c2f3d90dc1
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build_ref_db: set default threshold to 0.99
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2021-06-01 09:11:17 +12:00 |
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mercierc
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6b732d11d3
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align: fixed column URI parsing
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2021-06-01 09:10:21 +12:00 |
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mercierc
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9eb833a0af
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typo fix
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2021-06-01 09:09:16 +12:00 |
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mercierc
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6b7b0e3bd1
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cat: fixed the handling of dictionary columns
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2021-06-01 09:06:13 +12:00 |
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mercierc
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47691a8f58
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count: added option to specify the count column
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2021-06-01 09:05:14 +12:00 |
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mercierc
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b908b581c8
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clean: hid not implemented option
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2021-06-01 09:04:22 +12:00 |
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mercierc
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03c174fd7a
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grep: added taxonomy check
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2021-05-31 17:03:39 +12:00 |
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mercierc
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2156588ff6
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added TODO comment
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2021-05-31 17:01:57 +12:00 |
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mercierc
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6ff29c6a6a
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Increased maximum line count to 10E12
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2021-05-31 17:00:55 +12:00 |
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mercierc
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51a3c68fb5
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C: build_reference_db: fixed gcc warning/error
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2021-05-31 16:59:17 +12:00 |
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mercierc
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da91ffc2c7
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URI decoding: fixed reading a taxonomy before any view
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2021-05-31 16:57:20 +12:00 |
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mercierc
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c884615522
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obi stats: various fixes and improvements
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2021-05-31 16:51:06 +12:00 |
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